Cluster: HRGMv2_2300_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2300
- CGC Family ID: CGCFAM_10026
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2300_30 | HRGMv2_2300_30_3 | 3933 | 6482 | - | GH3 |
| TC | HRGMv2_2300_30 | HRGMv2_2300_30_4 | 6687 | 8054 | + | 2.A.66.1.26 |
| TF | HRGMv2_2300_30 | HRGMv2_2300_30_5 | 8262 | 8693 | + | MarR |
| TC | HRGMv2_2300_30 | HRGMv2_2300_30_6 | 8705 | 9982 | + | 2.A.115.2.14 |
Gene ID: HRGMv2_2300_30_3
Type: CAZyme
Location: 3933 - 6482 (-)
Type: CAZyme
Location: 3933 - 6482 (-)
Gene ID: HRGMv2_2300_30_4
Type: TC
Location: 6687 - 8054 (+)
Type: TC
Location: 6687 - 8054 (+)
Gene ID: HRGMv2_2300_30_5
Type: TF
Location: 8262 - 8693 (+)
Type: TF
Location: 8262 - 8693 (+)
Gene ID: HRGMv2_2300_30_6
Type: TC
Location: 8705 - 9982 (+)
Type: TC
Location: 8705 - 9982 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900551945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.