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Cluster: HRGMv2_2300_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2300_19 HRGMv2_2300_19_29 36588 37928 - 1.A.26.1.2
pfam HRGMv2_2300_19 HRGMv2_2300_19_30 38486 38986 - GreA_GreB | GreA_GreB_N
CAZyme HRGMv2_2300_19 HRGMv2_2300_19_31 39481 40548 - CE4
NULL(UNKNOWN) HRGMv2_2300_19 HRGMv2_2300_19_32 40670 40759 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2300_19 HRGMv2_2300_19_33 40719 41822 - 3.A.1.13.2
TC HRGMv2_2300_19 HRGMv2_2300_19_34 41831 42865 - 3.A.1.13.2
STP HRGMv2_2300_19 HRGMv2_2300_19_35 43115 44335 - Peripla_BP_2
CAZyme HRGMv2_2300_19 HRGMv2_2300_19_36 45267 46718 - PL9
TC HRGMv2_2300_19 HRGMv2_2300_19_37 47269 49173 - 1.B.52.2.1
Gene ID: HRGMv2_2300_19_29
Type: TC
Location: 36588 - 37928 (-)
Gene ID: HRGMv2_2300_19_30
Type: pfam
Location: 38486 - 38986 (-)
Gene ID: HRGMv2_2300_19_31
Type: CAZyme
Location: 39481 - 40548 (-)
Gene ID: HRGMv2_2300_19_32
Type:
Location: 40670 - 40759 (-)
Gene ID: HRGMv2_2300_19_33
Type: TC
Location: 40719 - 41822 (-)
Gene ID: HRGMv2_2300_19_34
Type: TC
Location: 41831 - 42865 (-)
Gene ID: HRGMv2_2300_19_35
Type: STP
Location: 43115 - 44335 (-)
Gene ID: HRGMv2_2300_19_36
Type: CAZyme
Location: 45267 - 46718 (-)
Gene ID: HRGMv2_2300_19_37
Type: TC
Location: 47269 - 49173 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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