Cluster: HRGMv2_2300_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2300
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2300_18 | HRGMv2_2300_18_32 | 35473 | 36492 | + | 2.A.56.1.5 |
| TC | HRGMv2_2300_18 | HRGMv2_2300_18_33 | 36528 | 36992 | + | 2.A.56.1.5 |
| TC | HRGMv2_2300_18 | HRGMv2_2300_18_34 | 37076 | 38383 | + | 2.A.56.1.5 |
| CAZyme | HRGMv2_2300_18 | HRGMv2_2300_18_35 | 38575 | 39702 | + | GH105 |
Gene ID: HRGMv2_2300_18_32
Type: TC
Location: 35473 - 36492 (+)
Type: TC
Location: 35473 - 36492 (+)
Gene ID: HRGMv2_2300_18_33
Type: TC
Location: 36528 - 36992 (+)
Type: TC
Location: 36528 - 36992 (+)
Gene ID: HRGMv2_2300_18_34
Type: TC
Location: 37076 - 38383 (+)
Type: TC
Location: 37076 - 38383 (+)
Gene ID: HRGMv2_2300_18_35
Type: CAZyme
Location: 38575 - 39702 (+)
Type: CAZyme
Location: 38575 - 39702 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900551945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.