Cluster: HRGMv2_2300_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2300
- CGC Family ID: CGCFAM_00288
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2300_9 | HRGMv2_2300_9_9 | 11717 | 12457 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_2300_9 | HRGMv2_2300_9_10 | 12603 | 14000 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_2300_9 | HRGMv2_2300_9_11 | 14287 | 15564 | + | M38.UNW |
| TC | HRGMv2_2300_9 | HRGMv2_2300_9_12 | 15808 | 17661 | - | 1.B.52.2.1 |
Gene ID: HRGMv2_2300_9_9
Type: CAZyme
Location: 11717 - 12457 (-)
Type: CAZyme
Location: 11717 - 12457 (-)
Gene ID: HRGMv2_2300_9_10
Type:
Location: 12603 - 14000 (-)
Type:
Location: 12603 - 14000 (-)
Gene ID: HRGMv2_2300_9_11
Type: peptidase
Location: 14287 - 15564 (+)
Type: peptidase
Location: 14287 - 15564 (+)
Gene ID: HRGMv2_2300_9_12
Type: TC
Location: 15808 - 17661 (-)
Type: TC
Location: 15808 - 17661 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900551945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.