dbCAN Logo

Cluster: HRGMv2_2299_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2299_12 HRGMv2_2299_12_60 58241 60049 + CBM34 | GH13_20
TF HRGMv2_2299_12 HRGMv2_2299_12_61 60064 60945 + HTH_AraC | HTH_AraC
TC HRGMv2_2299_12 HRGMv2_2299_12_62 61006 62079 - 8.A.59.4.2
sulfatase HRGMv2_2299_12 HRGMv2_2299_12_63 62105 63877 - S1_27
TC HRGMv2_2299_12 HRGMv2_2299_12_64 63905 64978 - 8.A.59.4.2
pfam HRGMv2_2299_12 HRGMv2_2299_12_65 65112 65960 - Big_2
TC HRGMv2_2299_12 HRGMv2_2299_12_66 66028 67920 - 3.A.1.135.5
TC HRGMv2_2299_12 HRGMv2_2299_12_67 67923 69671 - 3.A.1.135.5
TF HRGMv2_2299_12 HRGMv2_2299_12_68 69664 70113 - MarR
TC HRGMv2_2299_12 HRGMv2_2299_12_69 70226 71161 - 1.A.35.3.2
Gene ID: HRGMv2_2299_12_60
Type: CAZyme
Location: 58241 - 60049 (+)
Gene ID: HRGMv2_2299_12_61
Type: TF
Location: 60064 - 60945 (+)
Gene ID: HRGMv2_2299_12_62
Type: TC
Location: 61006 - 62079 (-)
Gene ID: HRGMv2_2299_12_63
Type: sulfatase
Location: 62105 - 63877 (-)
Gene ID: HRGMv2_2299_12_64
Type: TC
Location: 63905 - 64978 (-)
Gene ID: HRGMv2_2299_12_65
Type: pfam
Location: 65112 - 65960 (-)
Gene ID: HRGMv2_2299_12_66
Type: TC
Location: 66028 - 67920 (-)
Gene ID: HRGMv2_2299_12_67
Type: TC
Location: 67923 - 69671 (-)
Gene ID: HRGMv2_2299_12_68
Type: TF
Location: 69664 - 70113 (-)
Gene ID: HRGMv2_2299_12_69
Type: TC
Location: 70226 - 71161 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List