Cluster: HRGMv2_2299_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2299
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2299_9 | HRGMv2_2299_9_77 | 75688 | 76359 | + | 3.D.1.8.1 |
| pfam | HRGMv2_2299_9 | HRGMv2_2299_9_78 | 76443 | 77513 | + | Metallophos |
| pfam | HRGMv2_2299_9 | HRGMv2_2299_9_79 | 77503 | 79074 | + | AAA_15 | AAA_23 | AAA_27 |
| CAZyme | HRGMv2_2299_9 | HRGMv2_2299_9_80 | 79090 | 80382 | + | GT2 |
| TF | HRGMv2_2299_9 | HRGMv2_2299_9_81 | 80379 | 81287 | + | HTH_1 |
| TC | HRGMv2_2299_9 | HRGMv2_2299_9_82 | 81420 | 82763 | + | 2.A.111.1.2 |
Gene ID: HRGMv2_2299_9_77
Type: TC
Location: 75688 - 76359 (+)
Type: TC
Location: 75688 - 76359 (+)
Gene ID: HRGMv2_2299_9_78
Type: pfam
Location: 76443 - 77513 (+)
Type: pfam
Location: 76443 - 77513 (+)
Gene ID: HRGMv2_2299_9_79
Type: pfam
Location: 77503 - 79074 (+)
Type: pfam
Location: 77503 - 79074 (+)
Gene ID: HRGMv2_2299_9_80
Type: CAZyme
Location: 79090 - 80382 (+)
Type: CAZyme
Location: 79090 - 80382 (+)
Gene ID: HRGMv2_2299_9_81
Type: TF
Location: 80379 - 81287 (+)
Type: TF
Location: 80379 - 81287 (+)
Gene ID: HRGMv2_2299_9_82
Type: TC
Location: 81420 - 82763 (+)
Type: TC
Location: 81420 - 82763 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA2821
Species
UBA2821 sp902763335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.