Cluster: HRGMv2_2299_CGC16
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2299
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2299_7 | HRGMv2_2299_7_77 | 80182 | 81363 | - | 3.A.7.15.1 |
| pfam | HRGMv2_2299_7 | HRGMv2_2299_7_78 | 81383 | 82414 | - | TadZ-like_ARD |
| pfam | HRGMv2_2299_7 | HRGMv2_2299_7_79 | 82616 | 82816 | + | DUF2508 |
| CAZyme | HRGMv2_2299_7 | HRGMv2_2299_7_80 | 82927 | 84534 | - | GH13_31 |
| NULL(UNKNOWN) | HRGMv2_2299_7 | HRGMv2_2299_7_81 | 84557 | 84784 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2299_7 | HRGMv2_2299_7_82 | 84913 | 86790 | - | 3.A.3.6.10 |
| STP | HRGMv2_2299_7 | HRGMv2_2299_7_83 | 86825 | 87043 | - | HMA |
| TC | HRGMv2_2299_7 | HRGMv2_2299_7_84 | 87232 | 89883 | - | 3.A.1.122.13 |
| pfam | HRGMv2_2299_7 | HRGMv2_2299_7_85 | 90688 | 91524 | + | S6PP | S6PP | Hydrolase_3 |
| TC | HRGMv2_2299_7 | HRGMv2_2299_7_86 | 91600 | 92394 | - | 3.A.1.34.1 |
| TC | HRGMv2_2299_7 | HRGMv2_2299_7_87 | 92397 | 93365 | - | 3.A.1.34.1 |
Gene ID: HRGMv2_2299_7_77
Type: TC
Location: 80182 - 81363 (-)
Type: TC
Location: 80182 - 81363 (-)
Gene ID: HRGMv2_2299_7_78
Type: pfam
Location: 81383 - 82414 (-)
Type: pfam
Location: 81383 - 82414 (-)
Gene ID: HRGMv2_2299_7_79
Type: pfam
Location: 82616 - 82816 (+)
Type: pfam
Location: 82616 - 82816 (+)
Gene ID: HRGMv2_2299_7_80
Type: CAZyme
Location: 82927 - 84534 (-)
Type: CAZyme
Location: 82927 - 84534 (-)
Gene ID: HRGMv2_2299_7_81
Type:
Location: 84557 - 84784 (-)
Type:
Location: 84557 - 84784 (-)
Gene ID: HRGMv2_2299_7_82
Type: TC
Location: 84913 - 86790 (-)
Type: TC
Location: 84913 - 86790 (-)
Gene ID: HRGMv2_2299_7_83
Type: STP
Location: 86825 - 87043 (-)
Type: STP
Location: 86825 - 87043 (-)
Gene ID: HRGMv2_2299_7_84
Type: TC
Location: 87232 - 89883 (-)
Type: TC
Location: 87232 - 89883 (-)
Gene ID: HRGMv2_2299_7_85
Type: pfam
Location: 90688 - 91524 (+)
Type: pfam
Location: 90688 - 91524 (+)
Gene ID: HRGMv2_2299_7_86
Type: TC
Location: 91600 - 92394 (-)
Type: TC
Location: 91600 - 92394 (-)
Gene ID: HRGMv2_2299_7_87
Type: TC
Location: 92397 - 93365 (-)
Type: TC
Location: 92397 - 93365 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA2821
Species
UBA2821 sp902763335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.