Cluster: HRGMv2_2293_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2293
- CGC Family ID: CGCFAM_00408
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2293_28 | HRGMv2_2293_28_2 | 1413 | 2333 | + | 3.A.1.1.11 |
| TC | HRGMv2_2293_28 | HRGMv2_2293_28_3 | 2352 | 3185 | + | 3.A.1.1.34 |
| CAZyme | HRGMv2_2293_28 | HRGMv2_2293_28_4 | 3205 | 4881 | + | GH2 |
Gene ID: HRGMv2_2293_28_2
Type: TC
Location: 1413 - 2333 (+)
Type: TC
Location: 1413 - 2333 (+)
Gene ID: HRGMv2_2293_28_3
Type: TC
Location: 2352 - 3185 (+)
Type: TC
Location: 2352 - 3185 (+)
Gene ID: HRGMv2_2293_28_4
Type: CAZyme
Location: 3205 - 4881 (+)
Type: CAZyme
Location: 3205 - 4881 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp934418055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.