Cluster: HRGMv2_2293_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2293
- CGC Family ID: CGCFAM_03505
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2293_6 | HRGMv2_2293_6_1 | 44 | 1363 | - | 2.A.66.1.28 |
| STP | HRGMv2_2293_6 | HRGMv2_2293_6_2 | 1367 | 1921 | - | HD |
| NULL(UNKNOWN) | HRGMv2_2293_6 | HRGMv2_2293_6_3 | 2102 | 2788 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2293_6 | HRGMv2_2293_6_4 | 2918 | 4492 | - | GH77 |
Gene ID: HRGMv2_2293_6_1
Type: TC
Location: 44 - 1363 (-)
Type: TC
Location: 44 - 1363 (-)
Gene ID: HRGMv2_2293_6_2
Type: STP
Location: 1367 - 1921 (-)
Type: STP
Location: 1367 - 1921 (-)
Gene ID: HRGMv2_2293_6_3
Type:
Location: 2102 - 2788 (+)
Type:
Location: 2102 - 2788 (+)
Gene ID: HRGMv2_2293_6_4
Type: CAZyme
Location: 2918 - 4492 (-)
Type: CAZyme
Location: 2918 - 4492 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp934418055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.