Cluster: HRGMv2_2293_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2293
- CGC Family ID: CGCFAM_02007
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2293_293 | HRGMv2_2293_293_1 | 1 | 1032 | - | 3.D.1.5.1 |
| pfam | HRGMv2_2293_293 | HRGMv2_2293_293_2 | 1044 | 1421 | - | 2Fe-2S_thioredx |
| TC | HRGMv2_2293_293 | HRGMv2_2293_293_3 | 1440 | 1934 | - | 3.D.1.5.1 |
| CAZyme | HRGMv2_2293_293 | HRGMv2_2293_293_4 | 2275 | 3225 | + | CE4 |
Gene ID: HRGMv2_2293_293_1
Type: TC
Location: 1 - 1032 (-)
Type: TC
Location: 1 - 1032 (-)
Gene ID: HRGMv2_2293_293_2
Type: pfam
Location: 1044 - 1421 (-)
Type: pfam
Location: 1044 - 1421 (-)
Gene ID: HRGMv2_2293_293_3
Type: TC
Location: 1440 - 1934 (-)
Type: TC
Location: 1440 - 1934 (-)
Gene ID: HRGMv2_2293_293_4
Type: CAZyme
Location: 2275 - 3225 (+)
Type: CAZyme
Location: 2275 - 3225 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp934418055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.