Cluster: HRGMv2_2293_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2293
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2293_226 | HRGMv2_2293_226_1 | 150 | 1298 | - | CE9 |
| STP | HRGMv2_2293_226 | HRGMv2_2293_226_2 | 1385 | 2434 | - | SIS | SIS |
| pfam | HRGMv2_2293_226 | HRGMv2_2293_226_3 | 2479 | 3336 | - | F_bP_aldolase |
| TC | HRGMv2_2293_226 | HRGMv2_2293_226_4 | 3355 | 4194 | - | 3.A.1.1.41 |
| TC | HRGMv2_2293_226 | HRGMv2_2293_226_5 | 4212 | 4925 | - | 3.A.1.1.7 |
Gene ID: HRGMv2_2293_226_1
Type: CAZyme
Location: 150 - 1298 (-)
Type: CAZyme
Location: 150 - 1298 (-)
Gene ID: HRGMv2_2293_226_2
Type: STP
Location: 1385 - 2434 (-)
Type: STP
Location: 1385 - 2434 (-)
Gene ID: HRGMv2_2293_226_3
Type: pfam
Location: 2479 - 3336 (-)
Type: pfam
Location: 2479 - 3336 (-)
Gene ID: HRGMv2_2293_226_4
Type: TC
Location: 3355 - 4194 (-)
Type: TC
Location: 3355 - 4194 (-)
Gene ID: HRGMv2_2293_226_5
Type: TC
Location: 4212 - 4925 (-)
Type: TC
Location: 4212 - 4925 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp934418055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.