Cluster: HRGMv2_2293_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2293
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2293_219 | HRGMv2_2293_219_2 | 759 | 1826 | + | GT28 |
| STP | HRGMv2_2293_219 | HRGMv2_2293_219_3 | 1854 | 2396 | - | Sigma70_r2 | Sigma70_r4_2 |
| pfam | HRGMv2_2293_219 | HRGMv2_2293_219_4 | 2450 | 2866 | - | HIT | DcpS_C |
| TC | HRGMv2_2293_219 | HRGMv2_2293_219_5 | 2868 | 3497 | - | 9.B.104.1.3 |
Gene ID: HRGMv2_2293_219_2
Type: CAZyme
Location: 759 - 1826 (+)
Type: CAZyme
Location: 759 - 1826 (+)
Gene ID: HRGMv2_2293_219_3
Type: STP
Location: 1854 - 2396 (-)
Type: STP
Location: 1854 - 2396 (-)
Gene ID: HRGMv2_2293_219_4
Type: pfam
Location: 2450 - 2866 (-)
Type: pfam
Location: 2450 - 2866 (-)
Gene ID: HRGMv2_2293_219_5
Type: TC
Location: 2868 - 3497 (-)
Type: TC
Location: 2868 - 3497 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp934418055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.