Cluster: HRGMv2_2293_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2293
- CGC Family ID: CGCFAM_10024
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2293_150 | HRGMv2_2293_150_1 | 2 | 835 | - | 2.A.45.2.6 |
| STP | HRGMv2_2293_150 | HRGMv2_2293_150_2 | 839 | 1774 | - | PfkB |
| CAZyme | HRGMv2_2293_150 | HRGMv2_2293_150_3 | 1891 | 3207 | - | GH28 |
| pfam | HRGMv2_2293_150 | HRGMv2_2293_150_4 | 3245 | 4060 | - | YitT_membrane | DUF2179 |
| CAZyme | HRGMv2_2293_150 | HRGMv2_2293_150_5 | 4312 | 5331 | - | GT2 |
Gene ID: HRGMv2_2293_150_1
Type: TC
Location: 2 - 835 (-)
Type: TC
Location: 2 - 835 (-)
Gene ID: HRGMv2_2293_150_2
Type: STP
Location: 839 - 1774 (-)
Type: STP
Location: 839 - 1774 (-)
Gene ID: HRGMv2_2293_150_3
Type: CAZyme
Location: 1891 - 3207 (-)
Type: CAZyme
Location: 1891 - 3207 (-)
Gene ID: HRGMv2_2293_150_4
Type: pfam
Location: 3245 - 4060 (-)
Type: pfam
Location: 3245 - 4060 (-)
Gene ID: HRGMv2_2293_150_5
Type: CAZyme
Location: 4312 - 5331 (-)
Type: CAZyme
Location: 4312 - 5331 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp934418055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.