Cluster: HRGMv2_2293_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2293
- CGC Family ID: CGCFAM_01512
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2293_146 | HRGMv2_2293_146_2 | 1314 | 2039 | - | GT51 |
| TC | HRGMv2_2293_146 | HRGMv2_2293_146_3 | 2173 | 3096 | - | 2.A.69.4.3 |
| pfam | HRGMv2_2293_146 | HRGMv2_2293_146_4 | 3112 | 3657 | - | Chromate_transp |
| pfam | HRGMv2_2293_146 | HRGMv2_2293_146_5 | 3641 | 4213 | - | Chromate_transp |
| TC | HRGMv2_2293_146 | HRGMv2_2293_146_6 | 4423 | 5220 | - | 3.A.1.34.1 |
| TC | HRGMv2_2293_146 | HRGMv2_2293_146_7 | 5220 | 6140 | - | 3.A.1.34.1 |
Gene ID: HRGMv2_2293_146_2
Type: CAZyme
Location: 1314 - 2039 (-)
Type: CAZyme
Location: 1314 - 2039 (-)
Gene ID: HRGMv2_2293_146_3
Type: TC
Location: 2173 - 3096 (-)
Type: TC
Location: 2173 - 3096 (-)
Gene ID: HRGMv2_2293_146_4
Type: pfam
Location: 3112 - 3657 (-)
Type: pfam
Location: 3112 - 3657 (-)
Gene ID: HRGMv2_2293_146_5
Type: pfam
Location: 3641 - 4213 (-)
Type: pfam
Location: 3641 - 4213 (-)
Gene ID: HRGMv2_2293_146_6
Type: TC
Location: 4423 - 5220 (-)
Type: TC
Location: 4423 - 5220 (-)
Gene ID: HRGMv2_2293_146_7
Type: TC
Location: 5220 - 6140 (-)
Type: TC
Location: 5220 - 6140 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp934418055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.