Cluster: HRGMv2_2293_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2293
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2293_3 | HRGMv2_2293_3_8 | 7856 | 8800 | + | GT2 |
| CAZyme | HRGMv2_2293_3 | HRGMv2_2293_3_9 | 8797 | 11046 | + | GT2 | GT2 |
| CAZyme | HRGMv2_2293_3 | HRGMv2_2293_3_10 | 11051 | 12064 | + | GT2 |
| TC | HRGMv2_2293_3 | HRGMv2_2293_3_11 | 12155 | 13573 | + | 9.B.18.1.1 |
Gene ID: HRGMv2_2293_3_8
Type: CAZyme
Location: 7856 - 8800 (+)
Type: CAZyme
Location: 7856 - 8800 (+)
Gene ID: HRGMv2_2293_3_9
Type: CAZyme
Location: 8797 - 11046 (+)
Type: CAZyme
Location: 8797 - 11046 (+)
Gene ID: HRGMv2_2293_3_10
Type: CAZyme
Location: 11051 - 12064 (+)
Type: CAZyme
Location: 11051 - 12064 (+)
Gene ID: HRGMv2_2293_3_11
Type: TC
Location: 12155 - 13573 (+)
Type: TC
Location: 12155 - 13573 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp934418055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.