Cluster: HRGMv2_2293_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2293
- CGC Family ID: CGCFAM_01031
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2293_104 | HRGMv2_2293_104_2 | 732 | 2312 | + | CBM91 | GH43_12 |
| TC | HRGMv2_2293_104 | HRGMv2_2293_104_3 | 2393 | 4189 | - | 3.A.1.106.2 |
| CAZyme | HRGMv2_2293_104 | HRGMv2_2293_104_4 | 4186 | 5598 | - | GH4 |
| CAZyme | HRGMv2_2293_104 | HRGMv2_2293_104_5 | 5623 | 7677 | - | GH3 |
Gene ID: HRGMv2_2293_104_2
Type: CAZyme
Location: 732 - 2312 (+)
Type: CAZyme
Location: 732 - 2312 (+)
Gene ID: HRGMv2_2293_104_3
Type: TC
Location: 2393 - 4189 (-)
Type: TC
Location: 2393 - 4189 (-)
Gene ID: HRGMv2_2293_104_4
Type: CAZyme
Location: 4186 - 5598 (-)
Type: CAZyme
Location: 4186 - 5598 (-)
Gene ID: HRGMv2_2293_104_5
Type: CAZyme
Location: 5623 - 7677 (-)
Type: CAZyme
Location: 5623 - 7677 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp934418055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.