Cluster: HRGMv2_2293_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2293
- CGC Family ID: CGCFAM_01669
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2293_73 | HRGMv2_2293_73_1 | 1 | 789 | + | 8.A.59.2.1 |
| STP | HRGMv2_2293_73 | HRGMv2_2293_73_2 | 912 | 2261 | + | SBP_bac_1 |
| TC | HRGMv2_2293_73 | HRGMv2_2293_73_3 | 2322 | 3227 | + | 3.A.1.1.28 |
| TC | HRGMv2_2293_73 | HRGMv2_2293_73_4 | 3243 | 4076 | + | 3.A.1.1.20 |
| CAZyme | HRGMv2_2293_73 | HRGMv2_2293_73_5 | 4093 | 5244 | + | GH177 |
Gene ID: HRGMv2_2293_73_1
Type: TC
Location: 1 - 789 (+)
Type: TC
Location: 1 - 789 (+)
Gene ID: HRGMv2_2293_73_2
Type: STP
Location: 912 - 2261 (+)
Type: STP
Location: 912 - 2261 (+)
Gene ID: HRGMv2_2293_73_3
Type: TC
Location: 2322 - 3227 (+)
Type: TC
Location: 2322 - 3227 (+)
Gene ID: HRGMv2_2293_73_4
Type: TC
Location: 3243 - 4076 (+)
Type: TC
Location: 3243 - 4076 (+)
Gene ID: HRGMv2_2293_73_5
Type: CAZyme
Location: 4093 - 5244 (+)
Type: CAZyme
Location: 4093 - 5244 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp934418055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.