Cluster: HRGMv2_2293_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2293
- CGC Family ID: CGCFAM_00259
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2293_68 | HRGMv2_2293_68_3 | 3926 | 4858 | + | 3.A.1.1.10 |
| TC | HRGMv2_2293_68 | HRGMv2_2293_68_4 | 4873 | 5754 | + | 3.A.1.1.10 |
| CAZyme | HRGMv2_2293_68 | HRGMv2_2293_68_5 | 5867 | 7021 | + | GH88 |
Gene ID: HRGMv2_2293_68_3
Type: TC
Location: 3926 - 4858 (+)
Type: TC
Location: 3926 - 4858 (+)
Gene ID: HRGMv2_2293_68_4
Type: TC
Location: 4873 - 5754 (+)
Type: TC
Location: 4873 - 5754 (+)
Gene ID: HRGMv2_2293_68_5
Type: CAZyme
Location: 5867 - 7021 (+)
Type: CAZyme
Location: 5867 - 7021 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp934418055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.