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Cluster: HRGMv2_2284_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2284_8 HRGMv2_2284_8_45 54011 55357 + GH13_20
CAZyme HRGMv2_2284_8 HRGMv2_2284_8_46 55367 57403 + CBM48 | GH13_9
pfam HRGMv2_2284_8 HRGMv2_2284_8_47 57469 57762 + BofA
NULL(UNKNOWN) HRGMv2_2284_8 HRGMv2_2284_8_48 58006 58875 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2284_8 HRGMv2_2284_8_49 58887 60176 + 3.A.7.15.1
NULL(UNKNOWN) HRGMv2_2284_8 HRGMv2_2284_8_50 60173 60922 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2284_8 HRGMv2_2284_8_51 60928 62142 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2284_8 HRGMv2_2284_8_52 62153 62320 + 1.E.52.1.1
Gene ID: HRGMv2_2284_8_45
Type: CAZyme
Location: 54011 - 55357 (+)
Gene ID: HRGMv2_2284_8_46
Type: CAZyme
Location: 55367 - 57403 (+)
Gene ID: HRGMv2_2284_8_47
Type: pfam
Location: 57469 - 57762 (+)
Gene ID: HRGMv2_2284_8_48
Type:
Location: 58006 - 58875 (+)
Gene ID: HRGMv2_2284_8_49
Type: TC
Location: 58887 - 60176 (+)
Gene ID: HRGMv2_2284_8_50
Type:
Location: 60173 - 60922 (+)
Gene ID: HRGMv2_2284_8_51
Type:
Location: 60928 - 62142 (+)
Gene ID: HRGMv2_2284_8_52
Type: TC
Location: 62153 - 62320 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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