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Cluster: HRGMv2_2284_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2284_8 HRGMv2_2284_8_30 34206 34886 + 9.B.120.1.3
STP HRGMv2_2284_8 HRGMv2_2284_8_31 34993 36285 + ACT
pfam HRGMv2_2284_8 HRGMv2_2284_8_32 36364 37194 + PNP_UDP_1
TC HRGMv2_2284_8 HRGMv2_2284_8_33 37225 38604 + 2.A.38.1.1
TC HRGMv2_2284_8 HRGMv2_2284_8_34 38608 40047 + 2.A.38.1.1
CAZyme HRGMv2_2284_8 HRGMv2_2284_8_35 40051 40758 - CE4
TC HRGMv2_2284_8 HRGMv2_2284_8_36 40855 41775 - 2.A.19.5.2
NULL(UNKNOWN) HRGMv2_2284_8 HRGMv2_2284_8_37 41782 42051 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_2284_8 HRGMv2_2284_8_38 42178 42726 + HTH_11
TC HRGMv2_2284_8 HRGMv2_2284_8_39 42742 43812 + 9.A.23.1.1
Gene ID: HRGMv2_2284_8_30
Type: TC
Location: 34206 - 34886 (+)
Gene ID: HRGMv2_2284_8_31
Type: STP
Location: 34993 - 36285 (+)
Gene ID: HRGMv2_2284_8_32
Type: pfam
Location: 36364 - 37194 (+)
Gene ID: HRGMv2_2284_8_33
Type: TC
Location: 37225 - 38604 (+)
Gene ID: HRGMv2_2284_8_34
Type: TC
Location: 38608 - 40047 (+)
Gene ID: HRGMv2_2284_8_35
Type: CAZyme
Location: 40051 - 40758 (-)
Gene ID: HRGMv2_2284_8_36
Type: TC
Location: 40855 - 41775 (-)
Gene ID: HRGMv2_2284_8_37
Type:
Location: 41782 - 42051 (-)
Gene ID: HRGMv2_2284_8_38
Type: TF
Location: 42178 - 42726 (+)
Gene ID: HRGMv2_2284_8_39
Type: TC
Location: 42742 - 43812 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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