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Cluster: HRGMv2_2276_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2276_1 HRGMv2_2276_1_100 111065 111811 + GT2
NULL(UNKNOWN) HRGMv2_2276_1 HRGMv2_2276_1_101 111808 113463 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2276_1 HRGMv2_2276_1_102 113460 114881 + GT4
TC HRGMv2_2276_1 HRGMv2_2276_1_103 114881 116338 + 2.A.66.6.2
NULL(UNKNOWN) HRGMv2_2276_1 HRGMv2_2276_1_104 116325 117818 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2276_1 HRGMv2_2276_1_105 117823 118887 + GT2
CAZyme HRGMv2_2276_1 HRGMv2_2276_1_106 118900 119886 + GT2
Gene ID: HRGMv2_2276_1_100
Type: CAZyme
Location: 111065 - 111811 (+)
Gene ID: HRGMv2_2276_1_101
Type:
Location: 111808 - 113463 (+)
Gene ID: HRGMv2_2276_1_102
Type: CAZyme
Location: 113460 - 114881 (+)
Gene ID: HRGMv2_2276_1_103
Type: TC
Location: 114881 - 116338 (+)
Gene ID: HRGMv2_2276_1_104
Type:
Location: 116325 - 117818 (+)
Gene ID: HRGMv2_2276_1_105
Type: CAZyme
Location: 117823 - 118887 (+)
Gene ID: HRGMv2_2276_1_106
Type: CAZyme
Location: 118900 - 119886 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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