PROTEIN: HRGMv2_2276_1_104
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Protein File & Metadata
Source:
HRGMv2_2276_1_104.pdb
Genome ID:
Protein ID:
HRGMv2_2276_1_104
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Protein Sequence
MRQDRDGKLM QWNIIVSMLS QIVSLIINLI SKRVICIYLN VEYLGLQSLY SNFCDVLSFA 60 YFGAGTAMLF SFYGPLARND KAQLTAIYRH YDNIYKKMTW ILTGAGILTT LPAVFSVNAS 120 IKDTEVAVTF LTFMLSIVLY NRYMVRNYFI QADQRRYFVA AVTGGVDAAA LAAEILVLKF 180 FRSYEAFVIC ILFKNLLINH IFGRYLKSRY PFLFVYTEPL GSAETERIKS NVSDMVMYRF 240 GKVLISNTDN IFISRFISTA MVGVYSNYQF IIAGITSLVS AFYEAITARV GQMLSVKGTE 300 EQYAQFRFYS FLNSWMTGAT VVCFYYLVQD FLKLWMGSVP QLTKEIILII IVNYYLETCR 360 FATKMYREGA GLFRNIKQMI LIKGLLNIVL SFIMGKMWGL AGILTATTIS SAVTLFWYEP 420 LVVYRYFKKS YINEFYYQVL TLLQMACSFM AAGLVSGCFS GSGTGGFLLK GAACAAAANI 480 CYILFYLALR MIRKKQG 497
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G262-F1-model_v4 | 2 | 491 | 1 | 465 | 0.8524 |
0.9048 |
| AF-Q58467-F1-model_v4 | 1 | 491 | 1 | 497 | 0.8324 |
0.8694 |
| AF-H9L497-F1-model_v4 | 2 | 491 | 1 | 473 | 0.8274 |
0.881 |
| AF-A0A0H3GSJ3-F1-model_v4 | 2 | 491 | 1 | 468 | 0.8244 |
0.8762 |
| AF-Q8DPI1-F1-model_v4 | 2 | 491 | 1 | 479 | 0.8233 |
0.8683 |
| AF-P77377-F1-model_v4 | 2 | 491 | 1 | 473 | 0.8205 |
0.8744 |
| AF-Q2G0R7-F1-model_v4 | 1 | 494 | 1 | 504 | 0.8187 |
0.8496 |
| AF-P37169-F1-model_v4 | 1 | 491 | 5 | 518 | 0.8108 |
0.8603 |
| AF-P37746-F1-model_v4 | 3 | 433 | 1 | 415 | 0.8101 |
0.8964 |
| AF-Q32ET1-F1-model_v4 | 6 | 491 | 1 | 505 | 0.8097 |
0.8576 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 4 | 490 | 1 | 497 | 0.8317 |
0.8802 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 491 | 32 | 536 | 0.7961 |
0.8588 |
| QNU38870.1 | GT4 | 5 | 492 | 1 | 466 | 0.7389 |
0.8731 |
| QJC17489.1 | GT2 | 1 | 490 | 123 | 831 | 0.7082 |
0.9105 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 3 | 497 | 1 | 523 | 0.6742 |
0.8784 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 491 | 1 | 479 | 0.6706 |
0.8913 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 497 | 1 | 851 | 0.6704 |
0.8519 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 10 | 497 | 1 | 838 | 0.6679 |
0.8581 |
| A0A4V3CWU6 | GT4 | 10 | 497 | 1 | 829 | 0.6626 |
0.8529 |
| AF-D1BIF1-F1-model_v4 | GT4 | 4 | 497 | 10 | 546 | 0.6575 |
0.8768 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 4 | 490 | 1 | 497 | 0.8317 |
0.8802 |
| A0A160T2N7 | GT28 | 1 | 491 | 32 | 536 | 0.7961 |
0.8588 |
| QNU38870.1 | GT4 | 5 | 492 | 1 | 466 | 0.7389 |
0.8731 |
| QJC17489.1 | GT2 | 1 | 490 | 123 | 831 | 0.7082 |
0.9105 |
| A0A3Q9G719 | GT4 | 3 | 497 | 1 | 523 | 0.6742 |
0.8784 |
| A0A517Z2I8 | GT2 | 1 | 491 | 1 | 479 | 0.6706 |
0.8913 |
| A0A3T0RPT8 | GT4 | 1 | 497 | 1 | 851 | 0.6704 |
0.8519 |
| A0A2U8PPB3 | GT4 | 10 | 497 | 1 | 838 | 0.6679 |
0.8581 |
| A0A4V3CWU6 | GT4 | 10 | 497 | 1 | 829 | 0.6626 |
0.8529 |
| D1BIF1 | GT4 | 4 | 497 | 10 | 546 | 0.6575 |
0.8768 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 13 | 490 | 1 | 496 | 0.8102 |
0.8594 |
| 6nc6-assembly2.cif.gz_B | 11 | 494 | 1 | 461 | 0.7905 |
0.8393 |
| 7wag-assembly1.cif.gz_A | 7 | 489 | 1 | 503 | 0.7845 |
0.8449 |
| 6cc4-assembly1.cif.gz_A | 1 | 490 | 53 | 605 | 0.7606 |
0.8611 |
| 6fhz-assembly1.cif.gz_A | 10 | 431 | 8 | 436 | 0.7536 |
0.8487 |
| 5y50-assembly1.cif.gz_A | 6 | 428 | 6 | 436 | 0.6807 |
0.7768 |
| 6hfb-assembly3.cif.gz_C | 1 | 429 | 2 | 447 | 0.6796 |
0.7671 |
| 4mlb-assembly1.cif.gz_C | 1 | 428 | 2 | 447 | 0.6776 |
0.7677 |
| 5xjj-assembly1.cif.gz_A | 5 | 428 | 6 | 434 | 0.6716 |
0.7639 |
| 6gwh-assembly1.cif.gz_A | 1 | 429 | 1 | 435 | 0.6704 |
0.7502 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 8 | 491 | 1 | 488 | 0.8764 |
0.9208 |
| AF-Q48457-F1-model_v4 | 2 | 491 | 1 | 472 | 0.8356 |
0.8858 |
| AF-Q58467-F1-model_v4 | 1 | 491 | 1 | 497 | 0.8324 |
0.8694 |
| AF-O34674-F1-model_v4 | 3 | 490 | 1 | 527 | 0.8211 |
0.888 |
| AF-P77377-F1-model_v4 | 2 | 491 | 1 | 473 | 0.8205 |
0.8744 |
| AF-O34238-F1-model_v4 | 1 | 491 | 1 | 519 | 0.8177 |
0.8678 |
| AF-Q99191-F1-model_v4 | 4 | 430 | 6 | 431 | 0.8135 |
0.8947 |
| AF-O32273-F1-model_v4 | 1 | 488 | 1 | 471 | 0.8118 |
0.8631 |
| AF-P37169-F1-model_v4 | 1 | 491 | 5 | 518 | 0.8108 |
0.8603 |
| AF-Q05347-F1-model_v4 | 4 | 430 | 1 | 429 | 0.8102 |
0.895 |