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Cluster: HRGMv2_2270_CGC106

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2270_47 HRGMv2_2270_47_6 5242 7002 - GH36
pfam HRGMv2_2270_47 HRGMv2_2270_47_7 7016 7693 - RloB
pfam HRGMv2_2270_47 HRGMv2_2270_47_8 7698 8924 - AAA_21 | AAA_23
CAZyme HRGMv2_2270_47 HRGMv2_2270_47_9 9135 11525 - GH31_15
NULL(UNKNOWN) HRGMv2_2270_47 HRGMv2_2270_47_10 11605 13374 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2270_47 HRGMv2_2270_47_11 13383 15107 - SBP_bac_1
TC HRGMv2_2270_47 HRGMv2_2270_47_12 15245 16138 - 3.A.1.1.29
TC HRGMv2_2270_47 HRGMv2_2270_47_13 16154 17098 - 3.A.1.1.41
TC HRGMv2_2270_47 HRGMv2_2270_47_14 17311 19185 + 8.A.59.2.1
Gene ID: HRGMv2_2270_47_6
Type: CAZyme
Location: 5242 - 7002 (-)
Gene ID: HRGMv2_2270_47_7
Type: pfam
Location: 7016 - 7693 (-)
Gene ID: HRGMv2_2270_47_8
Type: pfam
Location: 7698 - 8924 (-)
Gene ID: HRGMv2_2270_47_9
Type: CAZyme
Location: 9135 - 11525 (-)
Gene ID: HRGMv2_2270_47_10
Type:
Location: 11605 - 13374 (-)
Gene ID: HRGMv2_2270_47_11
Type: STP
Location: 13383 - 15107 (-)
Gene ID: HRGMv2_2270_47_12
Type: TC
Location: 15245 - 16138 (-)
Gene ID: HRGMv2_2270_47_13
Type: TC
Location: 16154 - 17098 (-)
Gene ID: HRGMv2_2270_47_14
Type: TC
Location: 17311 - 19185 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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