PROTEIN: HRGMv2_2270_47_10
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Protein File & Metadata
Source:
HRGMv2_2270_47_10.pdb
Genome ID:
Protein ID:
HRGMv2_2270_47_10
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Protein Sequence
MTEKKITCGG IRPLIYCISR EEGDPYLIHN YDGAVEFPPV TRCFILPFHG QGEYRSYEVT 60 SKEPFQVHIS ADEMEVTVSA DIGDAISQLA WKEFDGPPHC DVMGNSMELD FEKGDIFRDT 120 YYHFYWETLL PSVVERTRAK SYSNSDGYVV STLQKGAYAG TYPDVDHEFQ IKGRLAMADE 180 LDLAVVRRMM ELQLKLMAED PEQAFRDPCA IQPNGAREYH VRRNSLDNSE NAEMFLVTGN 240 IEIIESACFY YAAVKDDDWL RGHIEGLENS LSLVESCIDR QGRLWSDVYY EDQVIKDGRE 300 CMAQALAARS FEIMAGLEAV LKRDKQEEHY RAVSGLLKDA LVQALPTGFW DASKKRFIDW 360 VDRNSVSHDH IHLLANELPA LFHYTNPDQE QSVIRLMEAC FEEFQRFPSF VSARISDYTE 420 SEIGSGGPYD LCAAGRYWCW DFAYWREKGR TDILEQQLLA VCRQARMDEY RMGERYDMNY 480 VYYLSEKNWH GAAHYYEYPC VFIWNLIAGY AGVRFALQAD LEIEPMLAGD GRVRLENPQY 540 GIEYTVAGNT IFVKNLLAQE RSLLVKWKNE ERLVKLGENE TWSYTCGVN 589
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1C1CXE3-F1-model_v4 | 25 | 583 | 1 | 453 | 0.6763 |
0.7763 |
| AF-A0A1C1CTY2-F1-model_v4 | 1 | 588 | 6 | 683 | 0.65 |
0.7095 |
| AF-A0A1C1CEE8-F1-model_v4 | 5 | 588 | 4 | 547 | 0.6315 |
0.6738 |
| AF-A0A133CSL2-F1-model_v4 | 3 | 588 | 3 | 698 | 0.6171 |
0.6862 |
| AF-A0A175W6Z5-F1-model_v4 | 12 | 588 | 30 | 791 | 0.5989 |
0.7076 |
| AF-Q8DN23-F1-model_v4 | 8 | 585 | 6 | 764 | 0.5903 |
0.6887 |
| AF-X8FBP7-F1-model_v4 | 5 | 585 | 39 | 722 | 0.5899 |
0.6689 |
| AF-A0A132PBA8-F1-model_v4 | 21 | 588 | 133 | 667 | 0.5892 |
0.6954 |
| AF-A0A132ZDE7-F1-model_v4 | 9 | 588 | 8 | 726 | 0.5855 |
0.6682 |
| AF-A0A1D6GZA1-F1-model_v4 | 110 | 564 | 86 | 545 | 0.5852 |
0.7408 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A8A3PJU0-F1-model_v4 | GH78 | 109 | 587 | 1 | 499 | 0.71 |
0.8095 |
| AF-G2MXX1-F1-model_v4 | GH15 | 101 | 522 | 1 | 393 | 0.6881 |
0.8362 |
| AF-A0A518B485-F1-model_v4 | GH0 | 101 | 573 | 5 | 440 | 0.6777 |
0.7909 |
| AF-A0A5Q3LDV0-F1-model_v4 | GH0 | 104 | 571 | 3 | 432 | 0.677 |
0.7964 |
| AF-A0A5B9QEW2-F1-model_v4 | GH0 | 105 | 536 | 3 | 428 | 0.6743 |
0.7972 |
| AF-A0A518DUA7-F1-model_v4 | GH0 | 105 | 571 | 3 | 431 | 0.6743 |
0.793 |
| AF-A0A517R3Y9-F1-model_v4 | GH0 | 109 | 546 | 16 | 434 | 0.671 |
0.8074 |
| AF-A0A858RD18-F1-model_v4 | GH0 | 110 | 541 | 20 | 437 | 0.6694 |
0.81 |
| AF-D2QZW5-F1-model_v4 | GH0 | 110 | 535 | 15 | 427 | 0.6652 |
0.8094 |
| AF-A0A2Z3URJ3-F1-model_v4 | GH78 | 4 | 588 | 40 | 655 | 0.6647 |
0.7144 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160SYC4 | GH63 | 21 | 586 | 22 | 501 | 0.7233 |
0.8258 |
| A1QZG9 | GH63 | 61 | 588 | 10 | 485 | 0.7158 |
0.811 |
| A0A0S2JHJ9 | GH63 | 21 | 588 | 48 | 532 | 0.7154 |
0.8323 |
| WGQ08872.1 | GH78 | 18 | 589 | 1 | 423 | 0.7053 |
0.8339 |
| WFB36967.1 | GH63 | 33 | 585 | 1 | 478 | 0.7053 |
0.7905 |
| A0A7L8AIH8 | GH63 | 21 | 585 | 49 | 559 | 0.6981 |
0.7931 |
| A0A8E2Q950 | GH63 | 4 | 586 | 39 | 532 | 0.6874 |
0.7874 |
| A0A518D7S2 | GH63 | 28 | 585 | 31 | 547 | 0.6856 |
0.7681 |
| UDQ98627.1 | GH63 | 22 | 589 | 38 | 530 | 0.6814 |
0.7835 |
| A0A1D7QBQ1 | GH78 | 117 | 588 | 1 | 400 | 0.6734 |
0.8187 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7qsj-assembly2.cif.gz_B | 100 | 571 | 1 | 338 | 0.6487 |
0.8423 |
| 5z73-assembly1.cif.gz_B | 116 | 522 | 1 | 427 | 0.6467 |
0.7935 |
| 5z74-assembly1.cif.gz_B | 118 | 522 | 1 | 432 | 0.6449 |
0.7997 |
| 8hmm-assembly1.cif.gz_A | 3 | 588 | 12 | 639 | 0.6436 |
0.6848 |
| 5z74-assembly1.cif.gz_A | 116 | 522 | 1 | 441 | 0.6376 |
0.7953 |
| 1v7v-assembly1.cif.gz_A | 8 | 587 | 15 | 779 | 0.6246 |
0.7301 |
| 3qde-assembly1.cif.gz_B | 8 | 587 | 14 | 811 | 0.6223 |
0.7388 |
| 8ho9-assembly1.cif.gz_A | 8 | 587 | 14 | 811 | 0.6204 |
0.7366 |
| 8ho8-assembly1.cif.gz_B | 8 | 586 | 13 | 809 | 0.6199 |
0.7363 |
| 2cqt-assembly1.cif.gz_A | 8 | 587 | 15 | 822 | 0.6183 |
0.7379 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P94250-F1-model_v4 | 60 | 588 | 2 | 474 | 0.7246 |
0.8166 |
| AF-Q76IQ9-F1-model_v4 | 8 | 587 | 15 | 801 | 0.6277 |
0.7418 |
| AF-Q9F8X1-F1-model_v4 | 8 | 587 | 15 | 800 | 0.6253 |
0.7382 |
| AF-B9K7M6-F1-model_v4 | 8 | 587 | 14 | 813 | 0.6216 |
0.7386 |
| AF-Q7S0S2-F1-model_v4 | 12 | 587 | 31 | 791 | 0.5994 |
0.7089 |
| AF-Q8P3J4-F1-model_v4 | 12 | 588 | 37 | 798 | 0.5966 |
0.7066 |
| AF-Q9LQF2-F1-model_v4 | 110 | 522 | 75 | 531 | 0.589 |
0.8071 |
| AF-Q8GRC3-F1-model_v4 | 8 | 589 | 8 | 765 | 0.5795 |
0.6721 |
| AF-D6XZ22-F1-model_v4 | 9 | 586 | 19 | 761 | 0.579 |
0.6745 |
| AF-Q4J9D4-F1-model_v4 | 11 | 525 | 3 | 576 | 0.5762 |
0.6586 |