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Cluster: HRGMv2_2268_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2268_65 HRGMv2_2268_65_25 23556 24467 - GH43_22
sulfatase HRGMv2_2268_65 HRGMv2_2268_65_26 24525 26372 - S1_97
pfam HRGMv2_2268_65 HRGMv2_2268_65_27 26506 27144 - UPF0029 | DUF1949
CAZyme HRGMv2_2268_65 HRGMv2_2268_65_28 27157 29694 - GT51
TC HRGMv2_2268_65 HRGMv2_2268_65_29 30039 30674 + 9.A.11.1.1
pfam HRGMv2_2268_65 HRGMv2_2268_65_30 30684 31115 + SpoVAB
TC HRGMv2_2268_65 HRGMv2_2268_65_31 31137 31592 + 9.A.11.1.1
TC HRGMv2_2268_65 HRGMv2_2268_65_32 31612 32631 + 9.A.11.1.1
pfam HRGMv2_2268_65 HRGMv2_2268_65_33 32628 32984 + SpoVAC_SpoVAEB
CAZyme HRGMv2_2268_65 HRGMv2_2268_65_34 33155 36901 - GH36 | GH43_26
NULL(UNKNOWN) HRGMv2_2268_65 HRGMv2_2268_65_35 37072 38574 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2268_65 HRGMv2_2268_65_36 38706 39731 - 3.A.1.1.20
TC HRGMv2_2268_65 HRGMv2_2268_65_37 39724 40932 - 3.A.1.1.11
pfam HRGMv2_2268_65 HRGMv2_2268_65_38 40932 43547 - DUF5696
pfam HRGMv2_2268_65 HRGMv2_2268_65_39 43534 45639 - NHL | Yip1
TC HRGMv2_2268_65 HRGMv2_2268_65_40 45677 46549 - 3.A.1.1.20
TC HRGMv2_2268_65 HRGMv2_2268_65_41 46566 47444 - 3.A.1.1.34
Gene ID: HRGMv2_2268_65_25
Type: CAZyme
Location: 23556 - 24467 (-)
Gene ID: HRGMv2_2268_65_26
Type: sulfatase
Location: 24525 - 26372 (-)
Gene ID: HRGMv2_2268_65_27
Type: pfam
Location: 26506 - 27144 (-)
Gene ID: HRGMv2_2268_65_28
Type: CAZyme
Location: 27157 - 29694 (-)
Gene ID: HRGMv2_2268_65_29
Type: TC
Location: 30039 - 30674 (+)
Gene ID: HRGMv2_2268_65_30
Type: pfam
Location: 30684 - 31115 (+)
Gene ID: HRGMv2_2268_65_31
Type: TC
Location: 31137 - 31592 (+)
Gene ID: HRGMv2_2268_65_32
Type: TC
Location: 31612 - 32631 (+)
Gene ID: HRGMv2_2268_65_33
Type: pfam
Location: 32628 - 32984 (+)
Gene ID: HRGMv2_2268_65_34
Type: CAZyme
Location: 33155 - 36901 (-)
Gene ID: HRGMv2_2268_65_35
Type:
Location: 37072 - 38574 (-)
Gene ID: HRGMv2_2268_65_36
Type: TC
Location: 38706 - 39731 (-)
Gene ID: HRGMv2_2268_65_37
Type: TC
Location: 39724 - 40932 (-)
Gene ID: HRGMv2_2268_65_38
Type: pfam
Location: 40932 - 43547 (-)
Gene ID: HRGMv2_2268_65_39
Type: pfam
Location: 43534 - 45639 (-)
Gene ID: HRGMv2_2268_65_40
Type: TC
Location: 45677 - 46549 (-)
Gene ID: HRGMv2_2268_65_41
Type: TC
Location: 46566 - 47444 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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