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PROTEIN: HRGMv2_2268_65_35

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2268_65_35.pdb
Genome ID:
HRGMv2_2268
Protein ID:
HRGMv2_2268_65_35

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Detailed structural information will appear here after analysis...

Protein Sequence 
MSKNIKKVLC   LTLAVAMTGS   LFTACGKKEE   KKQVATLSPM   TEDEITLTYQ   FWEDGPIVDS 60
LNKEWAKKYP   NITVKPSEVL   VTDNNTNLTN   YLGTDNMPDV   FWVLGTPDFA   ITNGMLTNMD 120
GMWSADPDTK   NVIGGINEFQ   LGYLGTDGKW   TTPVKFFPTE   AWLNMNYFTT   HNADMPSTDW 180
TFEDMESLAE   SLTTGDGQGW   GVSEAVAVIT   WYPIASDADC   IGEFGWNGKE   FDLTNWADGV 240
EIEKGWIDKG   YKAPAVVEGT   DNQFPQDLGM   VAMRLDNWWC   WERYWNKDEM   YTRHVYWVPY 300
VLPHTEDNSS   SDTYLATMDF   GGIYADCAYP   REAYEVLKYF   AWGPEGWTYK   LSKYDEIVAV 360
GAEGDGASVS   GLVPGPINNC   PITTDDTIWE   EYQKKHPTTL   AGGDTEGKDQ   YGIDRAPYFD 420
AFFETVKNSK   WTCYGSAQIP   GFDTWLANNY   NSATMYDGFE   GVEKWVFEGG   GDPADKVAGL 480
TESANQTNQD   YINQIKSVLE 500
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0F8J3-F1-model_v4 43 494 29 436 0.7183 0.8301
AF-P71619-F1-model_v4 43 500 35 436 0.716 0.8393
AF-K0F2E6-F1-model_v4 43 500 42 442 0.7093 0.8387
AF-Q7AQ51-F1-model_v4 45 491 35 445 0.7081 0.8209
AF-P76042-F1-model_v4 41 491 25 430 0.7056 0.8153
AF-A0A133CDW9-F1-model_v4 43 493 43 444 0.7055 0.835
AF-O53485-F1-model_v4 45 491 36 439 0.7042 0.8247
AF-A0A132ZDH4-F1-model_v4 42 487 29 427 0.6935 0.8114
AF-K0EMP7-F1-model_v4 40 493 34 444 0.6927 0.8041
AF-K0EWS9-F1-model_v4 33 493 40 463 0.6918 0.7942
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K8EJG7-F1-model_v4 CBM50 , CE4 43 494 34 417 0.6436 0.7728
A0A0M1Q963 GH43_11 38 493 40 499 0.6248 0.7039
A0A9Q8PNJ5 GH4 42 491 469 866 0.5336 0.8409
AF-A0A7U1BNH7-F1-model_v4 GH10 42 491 28 420 0.5245 0.7863
AF-A0A1B0VLS2-F1-model_v4 CBM0 3 497 1 943 0.5089 0.6825
AF-A0A1Q2TKJ3-F1-model_v4 GH49 43 491 386 797 0.5064 0.7447
A0A242CSU4 CBM35 43 500 574 982 0.5023 0.8089
UJP10085.1 GH154 38 470 702 1167 0.3843 0.6493
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K8EJG7 CBM50 , CE4 43 494 34 417 0.6436 0.7728
A0A0M1Q963 GH43_11 38 493 40 499 0.6248 0.7039
K8E205 GH32 44 470 35 343 0.5836 0.7736
A0A9Q8PNJ5 GH4 42 491 469 866 0.5336 0.8409
A0A7U1BNH7 GH10 42 491 28 420 0.5245 0.7863
A0A1Q2TKJ3 GH49 43 491 386 797 0.5064 0.7447
A0A242CSU4 CBM35 43 500 574 982 0.5023 0.8089
UJP10085.1 GH154 38 470 702 1167 0.3843 0.6493
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4rk2-assembly1.cif.gz_A 44 490 1 393 0.7502 0.853
4mfi-assembly1.cif.gz_A 43 497 5 403 0.7394 0.8398
7bvt-assembly1.cif.gz_A 43 491 1 391 0.7383 0.8416
3uor-assembly2.cif.gz_B 45 500 1 395 0.7363 0.8369
6dtr-assembly1.cif.gz_A 44 490 1 393 0.7353 0.8355
5z6c-assembly1.cif.gz_A 46 492 1 376 0.7328 0.8496
7nbz-assembly2.cif.gz_B 43 488 1 385 0.7313 0.8388
7v09-assembly2.cif.gz_B 43 491 1 403 0.7198 0.8121
6wpn-assembly2.cif.gz_B 46 493 1 394 0.7183 0.8182
6x84-assembly2.cif.gz_B 43 495 1 414 0.7183 0.8013
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P29822-F1-model_v4 42 490 26 422 0.7071 0.8259
AF-P76042-F1-model_v4 41 491 25 430 0.7056 0.8153
AF-P94528-F1-model_v4 43 490 32 433 0.702 0.8213
AF-Q53684-F1-model_v4 42 500 26 434 0.6971 0.8168
AF-O31518-F1-model_v4 39 490 28 427 0.6909 0.8075
AF-Q8FVS7-F1-model_v4 42 490 23 411 0.6853 0.8067
AF-Q578M8-F1-model_v4 42 490 23 411 0.6831 0.8042
AF-Q2YKZ9-F1-model_v4 42 490 23 411 0.6809 0.8018
AF-Q55471-F1-model_v4 42 490 28 421 0.6766 0.7958
AF-Q9K491-F1-model_v4 37 495 30 425 0.6737 0.7931
Download Full SwissProt Results