Cluster: HRGMv2_2236_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2236
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2236_3 | HRGMv2_2236_3_98 | 118899 | 120446 | - | GH13_44 |
| pfam | HRGMv2_2236_3 | HRGMv2_2236_3_99 | 120458 | 121828 | - | Methyltr_RsmB-F | Methyltranf_PUA | Methyltransf_31 | Methyltr_RsmF_N | RsmF_methylt_CI |
| STP | HRGMv2_2236_3 | HRGMv2_2236_3_100 | 121979 | 122572 | + | TetR_N |
| TC | HRGMv2_2236_3 | HRGMv2_2236_3_101 | 122701 | 124230 | + | 2.A.21.2.5 |
| TF | HRGMv2_2236_3 | HRGMv2_2236_3_102 | 124549 | 125481 | + | MarR |
| CAZyme | HRGMv2_2236_3 | HRGMv2_2236_3_103 | 125606 | 127225 | - | GH43_4 |
Gene ID: HRGMv2_2236_3_98
Type: CAZyme
Location: 118899 - 120446 (-)
Type: CAZyme
Location: 118899 - 120446 (-)
Gene ID: HRGMv2_2236_3_99
Type: pfam
Location: 120458 - 121828 (-)
Type: pfam
Location: 120458 - 121828 (-)
Gene ID: HRGMv2_2236_3_100
Type: STP
Location: 121979 - 122572 (+)
Type: STP
Location: 121979 - 122572 (+)
Gene ID: HRGMv2_2236_3_101
Type: TC
Location: 122701 - 124230 (+)
Type: TC
Location: 122701 - 124230 (+)
Gene ID: HRGMv2_2236_3_102
Type: TF
Location: 124549 - 125481 (+)
Type: TF
Location: 124549 - 125481 (+)
Gene ID: HRGMv2_2236_3_103
Type: CAZyme
Location: 125606 - 127225 (-)
Type: CAZyme
Location: 125606 - 127225 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934418125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.