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Cluster: HRGMv2_2236_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2236_2 HRGMv2_2236_2_81 111063 112112 - 9.A.23.1.1
NULL(UNKNOWN) HRGMv2_2236_2 HRGMv2_2236_2_82 112271 112753 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2236_2 HRGMv2_2236_2_83 112800 113756 + CE4
TC HRGMv2_2236_2 HRGMv2_2236_2_84 113784 114887 + 3.A.1.1.38
TC HRGMv2_2236_2 HRGMv2_2236_2_85 114906 115796 + 3.A.1.1.34
TC HRGMv2_2236_2 HRGMv2_2236_2_86 115828 116703 + 3.A.1.1.20
STP HRGMv2_2236_2 HRGMv2_2236_2_87 116700 118301 + SBP_bac_1
NULL(UNKNOWN) HRGMv2_2236_2 HRGMv2_2236_2_88 118396 119148 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2236_2 HRGMv2_2236_2_89 119236 119862 + 2.A.115.2.14
Gene ID: HRGMv2_2236_2_81
Type: TC
Location: 111063 - 112112 (-)
Gene ID: HRGMv2_2236_2_82
Type:
Location: 112271 - 112753 (+)
Gene ID: HRGMv2_2236_2_83
Type: CAZyme
Location: 112800 - 113756 (+)
Gene ID: HRGMv2_2236_2_84
Type: TC
Location: 113784 - 114887 (+)
Gene ID: HRGMv2_2236_2_85
Type: TC
Location: 114906 - 115796 (+)
Gene ID: HRGMv2_2236_2_86
Type: TC
Location: 115828 - 116703 (+)
Gene ID: HRGMv2_2236_2_87
Type: STP
Location: 116700 - 118301 (+)
Gene ID: HRGMv2_2236_2_88
Type:
Location: 118396 - 119148 (+)
Gene ID: HRGMv2_2236_2_89
Type: TC
Location: 119236 - 119862 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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