Cluster: HRGMv2_2236_CGC41
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2236
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2236_28 | HRGMv2_2236_28_28 | 24926 | 26113 | - | 2.A.37.2.2 |
| TC | HRGMv2_2236_28 | HRGMv2_2236_28_29 | 26469 | 27821 | + | 2.A.66.1.33 |
| TF | HRGMv2_2236_28 | HRGMv2_2236_28_30 | 28070 | 28927 | + | HTH_AraC |
| CAZyme | HRGMv2_2236_28 | HRGMv2_2236_28_31 | 29116 | 31044 | + | GH127 |
Gene ID: HRGMv2_2236_28_28
Type: TC
Location: 24926 - 26113 (-)
Type: TC
Location: 24926 - 26113 (-)
Gene ID: HRGMv2_2236_28_29
Type: TC
Location: 26469 - 27821 (+)
Type: TC
Location: 26469 - 27821 (+)
Gene ID: HRGMv2_2236_28_30
Type: TF
Location: 28070 - 28927 (+)
Type: TF
Location: 28070 - 28927 (+)
Gene ID: HRGMv2_2236_28_31
Type: CAZyme
Location: 29116 - 31044 (+)
Type: CAZyme
Location: 29116 - 31044 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934418125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.