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Cluster: HRGMv2_2236_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2236_1 HRGMv2_2236_1_246 268503 270713 - GH36
pfam HRGMv2_2236_1 HRGMv2_2236_1_247 270789 272297 - FGGY_N | FGGY_C
TC HRGMv2_2236_1 HRGMv2_2236_1_248 272548 273531 + 2.A.69.4.5
pfam HRGMv2_2236_1 HRGMv2_2236_1_249 273652 275067 - PK | PK_C
TC HRGMv2_2236_1 HRGMv2_2236_1_250 275395 277164 - 1.A.11.2.7
TC HRGMv2_2236_1 HRGMv2_2236_1_251 277442 278374 - 2.A.69.4.3
Gene ID: HRGMv2_2236_1_246
Type: CAZyme
Location: 268503 - 270713 (-)
Gene ID: HRGMv2_2236_1_247
Type: pfam
Location: 270789 - 272297 (-)
Gene ID: HRGMv2_2236_1_248
Type: TC
Location: 272548 - 273531 (+)
Gene ID: HRGMv2_2236_1_249
Type: pfam
Location: 273652 - 275067 (-)
Gene ID: HRGMv2_2236_1_250
Type: TC
Location: 275395 - 277164 (-)
Gene ID: HRGMv2_2236_1_251
Type: TC
Location: 277442 - 278374 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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