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Cluster: HRGMv2_2236_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2236_20 HRGMv2_2236_20_49 47155 48609 - 2.A.38.1.6
TC HRGMv2_2236_20 HRGMv2_2236_20_50 48682 50040 - 3.A.3.1.8
CAZyme HRGMv2_2236_20 HRGMv2_2236_20_51 50213 51235 - GH130_2
CAZyme HRGMv2_2236_20 HRGMv2_2236_20_52 51266 52438 - GH130_1
pfam HRGMv2_2236_20 HRGMv2_2236_20_53 52428 53603 - GlcNAc_2-epim
TC HRGMv2_2236_20 HRGMv2_2236_20_54 53643 54491 - 3.A.1.1.27
TC HRGMv2_2236_20 HRGMv2_2236_20_55 54492 55475 - 3.A.1.1.29
TC HRGMv2_2236_20 HRGMv2_2236_20_56 55580 57037 - 3.A.1.1.44
Gene ID: HRGMv2_2236_20_49
Type: TC
Location: 47155 - 48609 (-)
Gene ID: HRGMv2_2236_20_50
Type: TC
Location: 48682 - 50040 (-)
Gene ID: HRGMv2_2236_20_51
Type: CAZyme
Location: 50213 - 51235 (-)
Gene ID: HRGMv2_2236_20_52
Type: CAZyme
Location: 51266 - 52438 (-)
Gene ID: HRGMv2_2236_20_53
Type: pfam
Location: 52428 - 53603 (-)
Gene ID: HRGMv2_2236_20_54
Type: TC
Location: 53643 - 54491 (-)
Gene ID: HRGMv2_2236_20_55
Type: TC
Location: 54492 - 55475 (-)
Gene ID: HRGMv2_2236_20_56
Type: TC
Location: 55580 - 57037 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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