Cluster: HRGMv2_2236_CGC34
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2236
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2236_20 | HRGMv2_2236_20_39 | 35436 | 37682 | + | GH31_1 |
| peptidase | HRGMv2_2236_20 | HRGMv2_2236_20_40 | 37746 | 39089 | + | I04.073 |
| NULL(UNKNOWN) | HRGMv2_2236_20 | HRGMv2_2236_20_41 | 39132 | 39593 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2236_20 | HRGMv2_2236_20_42 | 39846 | 41816 | - | 8.A.59.4.2 |
Gene ID: HRGMv2_2236_20_39
Type: CAZyme
Location: 35436 - 37682 (+)
Type: CAZyme
Location: 35436 - 37682 (+)
Gene ID: HRGMv2_2236_20_40
Type: peptidase
Location: 37746 - 39089 (+)
Type: peptidase
Location: 37746 - 39089 (+)
Gene ID: HRGMv2_2236_20_41
Type:
Location: 39132 - 39593 (-)
Type:
Location: 39132 - 39593 (-)
Gene ID: HRGMv2_2236_20_42
Type: TC
Location: 39846 - 41816 (-)
Type: TC
Location: 39846 - 41816 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934418125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2236_20_40 | vegetarian > omnivore | 1.39155 | 0.01810 |