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Cluster: HRGMv2_2236_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2236_16 HRGMv2_2236_16_46 39886 41751 - 9.B.34.1.3
pfam HRGMv2_2236_16 HRGMv2_2236_16_47 41726 42844 - Fe-ADH | Fe-ADH_2
CAZyme HRGMv2_2236_16 HRGMv2_2236_16_48 42876 44636 - CBM34 | GH13_20
NULL(UNKNOWN) HRGMv2_2236_16 HRGMv2_2236_16_49 44839 45021 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2236_16 HRGMv2_2236_16_50 45018 47024 - 9.A.8.1.6
TC HRGMv2_2236_16 HRGMv2_2236_16_51 47021 47245 - 9.A.8.1.6
TC HRGMv2_2236_16 HRGMv2_2236_16_52 47418 48251 - 3.A.1.29.1
TC HRGMv2_2236_16 HRGMv2_2236_16_53 48253 49959 - 3.A.1.29.1
TC HRGMv2_2236_16 HRGMv2_2236_16_54 50029 50571 - 3.A.1.29.1
Gene ID: HRGMv2_2236_16_46
Type: TC
Location: 39886 - 41751 (-)
Gene ID: HRGMv2_2236_16_47
Type: pfam
Location: 41726 - 42844 (-)
Gene ID: HRGMv2_2236_16_48
Type: CAZyme
Location: 42876 - 44636 (-)
Gene ID: HRGMv2_2236_16_49
Type:
Location: 44839 - 45021 (-)
Gene ID: HRGMv2_2236_16_50
Type: TC
Location: 45018 - 47024 (-)
Gene ID: HRGMv2_2236_16_51
Type: TC
Location: 47021 - 47245 (-)
Gene ID: HRGMv2_2236_16_52
Type: TC
Location: 47418 - 48251 (-)
Gene ID: HRGMv2_2236_16_53
Type: TC
Location: 48253 - 49959 (-)
Gene ID: HRGMv2_2236_16_54
Type: TC
Location: 50029 - 50571 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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