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Cluster: HRGMv2_2236_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_41 48066 49148 + GT8
pfam HRGMv2_2236_13 HRGMv2_2236_13_42 49161 49835 + Hexapep
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_43 49844 51052 + GT4
TC HRGMv2_2236_13 HRGMv2_2236_13_44 51057 52844 + 3.A.1.106.15
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_45 52924 53880 + GT2
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_46 53867 55045 + GT4
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_47 55038 55979 + GT2
pfam HRGMv2_2236_13 HRGMv2_2236_13_48 56008 56421 + FdtA
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_49 56405 57349 + GT2
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_50 57351 58202 + GT11
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_51 58217 59035 + GT6
pfam HRGMv2_2236_13 HRGMv2_2236_13_52 59044 60318 + PS_pyruv_trans
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_53 60315 61334 + GT8
TC HRGMv2_2236_13 HRGMv2_2236_13_54 61331 63136 + 3.A.1.106.15
Gene ID: HRGMv2_2236_13_41
Type: CAZyme
Location: 48066 - 49148 (+)
Gene ID: HRGMv2_2236_13_42
Type: pfam
Location: 49161 - 49835 (+)
Gene ID: HRGMv2_2236_13_43
Type: CAZyme
Location: 49844 - 51052 (+)
Gene ID: HRGMv2_2236_13_44
Type: TC
Location: 51057 - 52844 (+)
Gene ID: HRGMv2_2236_13_45
Type: CAZyme
Location: 52924 - 53880 (+)
Gene ID: HRGMv2_2236_13_46
Type: CAZyme
Location: 53867 - 55045 (+)
Gene ID: HRGMv2_2236_13_47
Type: CAZyme
Location: 55038 - 55979 (+)
Gene ID: HRGMv2_2236_13_48
Type: pfam
Location: 56008 - 56421 (+)
Gene ID: HRGMv2_2236_13_49
Type: CAZyme
Location: 56405 - 57349 (+)
Gene ID: HRGMv2_2236_13_50
Type: CAZyme
Location: 57351 - 58202 (+)
Gene ID: HRGMv2_2236_13_51
Type: CAZyme
Location: 58217 - 59035 (+)
Gene ID: HRGMv2_2236_13_52
Type: pfam
Location: 59044 - 60318 (+)
Gene ID: HRGMv2_2236_13_53
Type: CAZyme
Location: 60315 - 61334 (+)
Gene ID: HRGMv2_2236_13_54
Type: TC
Location: 61331 - 63136 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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