Cluster: HRGMv2_2236_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2236
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2236_11 | HRGMv2_2236_11_53 | 58286 | 59599 | - | GH27 |
| pfam | HRGMv2_2236_11 | HRGMv2_2236_11_54 | 59884 | 60948 | + | PDDEXK_2 |
| TC | HRGMv2_2236_11 | HRGMv2_2236_11_55 | 61282 | 61815 | - | 9.B.156.3.1 |
| CAZyme | HRGMv2_2236_11 | HRGMv2_2236_11_56 | 62002 | 63132 | + | CE2 |
| pfam | HRGMv2_2236_11 | HRGMv2_2236_11_57 | 63129 | 64010 | - | ROK |
| pfam | HRGMv2_2236_11 | HRGMv2_2236_11_58 | 64039 | 65409 | - | FAD-depend_C |
| TC | HRGMv2_2236_11 | HRGMv2_2236_11_59 | 65487 | 66080 | - | 9.B.156.3.1 |
Gene ID: HRGMv2_2236_11_53
Type: CAZyme
Location: 58286 - 59599 (-)
Type: CAZyme
Location: 58286 - 59599 (-)
Gene ID: HRGMv2_2236_11_54
Type: pfam
Location: 59884 - 60948 (+)
Type: pfam
Location: 59884 - 60948 (+)
Gene ID: HRGMv2_2236_11_55
Type: TC
Location: 61282 - 61815 (-)
Type: TC
Location: 61282 - 61815 (-)
Gene ID: HRGMv2_2236_11_56
Type: CAZyme
Location: 62002 - 63132 (+)
Type: CAZyme
Location: 62002 - 63132 (+)
Gene ID: HRGMv2_2236_11_57
Type: pfam
Location: 63129 - 64010 (-)
Type: pfam
Location: 63129 - 64010 (-)
Gene ID: HRGMv2_2236_11_58
Type: pfam
Location: 64039 - 65409 (-)
Type: pfam
Location: 64039 - 65409 (-)
Gene ID: HRGMv2_2236_11_59
Type: TC
Location: 65487 - 66080 (-)
Type: TC
Location: 65487 - 66080 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934418125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.