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Cluster: HRGMv2_2236_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2236_10 HRGMv2_2236_10_6 2837 4609 - 3.A.1.106.3
TC HRGMv2_2236_10 HRGMv2_2236_10_7 4590 6341 - 3.A.1.106.3
NULL(UNKNOWN) HRGMv2_2236_10 HRGMv2_2236_10_8 6630 6890 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2236_10 HRGMv2_2236_10_9 6902 7897 - 8.A.5.1.3
TC HRGMv2_2236_10 HRGMv2_2236_10_10 8139 8849 - 3.A.1.4.10
TC HRGMv2_2236_10 HRGMv2_2236_10_11 8900 9658 - 3.A.1.4.10
TC HRGMv2_2236_10 HRGMv2_2236_10_12 9662 10723 - 3.A.1.4.8
TC HRGMv2_2236_10 HRGMv2_2236_10_13 10761 11642 - 3.A.1.4.10
TC HRGMv2_2236_10 HRGMv2_2236_10_14 12069 13307 - 3.A.1.4.10
CAZyme HRGMv2_2236_10 HRGMv2_2236_10_15 13517 14827 - GH13_20
Gene ID: HRGMv2_2236_10_6
Type: TC
Location: 2837 - 4609 (-)
Gene ID: HRGMv2_2236_10_7
Type: TC
Location: 4590 - 6341 (-)
Gene ID: HRGMv2_2236_10_8
Type:
Location: 6630 - 6890 (-)
Gene ID: HRGMv2_2236_10_9
Type: TC
Location: 6902 - 7897 (-)
Gene ID: HRGMv2_2236_10_10
Type: TC
Location: 8139 - 8849 (-)
Gene ID: HRGMv2_2236_10_11
Type: TC
Location: 8900 - 9658 (-)
Gene ID: HRGMv2_2236_10_12
Type: TC
Location: 9662 - 10723 (-)
Gene ID: HRGMv2_2236_10_13
Type: TC
Location: 10761 - 11642 (-)
Gene ID: HRGMv2_2236_10_14
Type: TC
Location: 12069 - 13307 (-)
Gene ID: HRGMv2_2236_10_15
Type: CAZyme
Location: 13517 - 14827 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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