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Cluster: HRGMv2_2236_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2236_6 HRGMv2_2236_6_29 27708 28553 + 1.A.35.1.2
STP HRGMv2_2236_6 HRGMv2_2236_6_30 28683 31538 + HATPase_c | HisKA | Response_reg
TC HRGMv2_2236_6 HRGMv2_2236_6_31 31535 32098 + 2.A.51.1.6
TC HRGMv2_2236_6 HRGMv2_2236_6_32 32098 32655 + 2.A.51.1.6
STP HRGMv2_2236_6 HRGMv2_2236_6_33 32781 33362 + Pribosyltran
TC HRGMv2_2236_6 HRGMv2_2236_6_34 33413 34732 + 2.A.40.2.1
peptidase HRGMv2_2236_6 HRGMv2_2236_6_35 34786 36231 - M20.UPD
TC HRGMv2_2236_6 HRGMv2_2236_6_36 36274 37050 - 3.A.1.3.25
TC HRGMv2_2236_6 HRGMv2_2236_6_37 37034 37819 - 3.A.1.3.15
TC HRGMv2_2236_6 HRGMv2_2236_6_38 37936 38898 - 3.A.1.3.2
TC HRGMv2_2236_6 HRGMv2_2236_6_39 39112 40470 + 2.A.66.1.25
STP HRGMv2_2236_6 HRGMv2_2236_6_40 40530 41099 + TetR_N
pfam HRGMv2_2236_6 HRGMv2_2236_6_41 41306 43309 + MCRA | NAD_binding_8
TC HRGMv2_2236_6 HRGMv2_2236_6_42 43453 45072 + 2.A.35.2.1
CAZyme HRGMv2_2236_6 HRGMv2_2236_6_43 45116 47251 + GH36
TC HRGMv2_2236_6 HRGMv2_2236_6_44 47388 48269 + 3.A.1.3.28
TC HRGMv2_2236_6 HRGMv2_2236_6_45 48314 49024 + 3.A.1.3.14
TC HRGMv2_2236_6 HRGMv2_2236_6_46 49037 49822 + 3.A.1.3.14
Gene ID: HRGMv2_2236_6_29
Type: TC
Location: 27708 - 28553 (+)
Gene ID: HRGMv2_2236_6_30
Type: STP
Location: 28683 - 31538 (+)
Gene ID: HRGMv2_2236_6_31
Type: TC
Location: 31535 - 32098 (+)
Gene ID: HRGMv2_2236_6_32
Type: TC
Location: 32098 - 32655 (+)
Gene ID: HRGMv2_2236_6_33
Type: STP
Location: 32781 - 33362 (+)
Gene ID: HRGMv2_2236_6_34
Type: TC
Location: 33413 - 34732 (+)
Gene ID: HRGMv2_2236_6_35
Type: peptidase
Location: 34786 - 36231 (-)
Gene ID: HRGMv2_2236_6_36
Type: TC
Location: 36274 - 37050 (-)
Gene ID: HRGMv2_2236_6_37
Type: TC
Location: 37034 - 37819 (-)
Gene ID: HRGMv2_2236_6_38
Type: TC
Location: 37936 - 38898 (-)
Gene ID: HRGMv2_2236_6_39
Type: TC
Location: 39112 - 40470 (+)
Gene ID: HRGMv2_2236_6_40
Type: STP
Location: 40530 - 41099 (+)
Gene ID: HRGMv2_2236_6_41
Type: pfam
Location: 41306 - 43309 (+)
Gene ID: HRGMv2_2236_6_42
Type: TC
Location: 43453 - 45072 (+)
Gene ID: HRGMv2_2236_6_43
Type: CAZyme
Location: 45116 - 47251 (+)
Gene ID: HRGMv2_2236_6_44
Type: TC
Location: 47388 - 48269 (+)
Gene ID: HRGMv2_2236_6_45
Type: TC
Location: 48314 - 49024 (+)
Gene ID: HRGMv2_2236_6_46
Type: TC
Location: 49037 - 49822 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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