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Cluster: HRGMv2_2235_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2235_5 HRGMv2_2235_5_17 17287 18813 - 2.A.66.1.40
pfam HRGMv2_2235_5 HRGMv2_2235_5_18 18810 19658 - PS_pyruv_trans
CAZyme HRGMv2_2235_5 HRGMv2_2235_5_19 19655 20674 - GT2
CAZyme HRGMv2_2235_5 HRGMv2_2235_5_20 20655 21809 - GT4
NULL(UNKNOWN) HRGMv2_2235_5 HRGMv2_2235_5_21 21812 22972 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2235_5 HRGMv2_2235_5_22 22990 24384 - Wzy_C
CAZyme HRGMv2_2235_5 HRGMv2_2235_5_23 24389 25318 - GT2
CAZyme HRGMv2_2235_5 HRGMv2_2235_5_24 25351 26289 - GT2
Gene ID: HRGMv2_2235_5_17
Type: TC
Location: 17287 - 18813 (-)
Gene ID: HRGMv2_2235_5_18
Type: pfam
Location: 18810 - 19658 (-)
Gene ID: HRGMv2_2235_5_19
Type: CAZyme
Location: 19655 - 20674 (-)
Gene ID: HRGMv2_2235_5_20
Type: CAZyme
Location: 20655 - 21809 (-)
Gene ID: HRGMv2_2235_5_21
Type:
Location: 21812 - 22972 (-)
Gene ID: HRGMv2_2235_5_22
Type: pfam
Location: 22990 - 24384 (-)
Gene ID: HRGMv2_2235_5_23
Type: CAZyme
Location: 24389 - 25318 (-)
Gene ID: HRGMv2_2235_5_24
Type: CAZyme
Location: 25351 - 26289 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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