Cluster: HRGMv2_2235_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2235
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2235_3 | HRGMv2_2235_3_13 | 8150 | 10309 | + | GH112 |
| TC | HRGMv2_2235_3 | HRGMv2_2235_3_14 | 10380 | 11735 | + | 3.A.1.1.4 |
| TC | HRGMv2_2235_3 | HRGMv2_2235_3_15 | 11809 | 12687 | + | 3.A.1.1.4 |
| TC | HRGMv2_2235_3 | HRGMv2_2235_3_16 | 12680 | 13486 | + | 3.A.1.1.4 |
| NULL(UNKNOWN) | HRGMv2_2235_3 | HRGMv2_2235_3_17 | 13486 | 13959 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2235_3 | HRGMv2_2235_3_18 | 13910 | 15229 | + | GH136 |
Gene ID: HRGMv2_2235_3_13
Type: CAZyme
Location: 8150 - 10309 (+)
Type: CAZyme
Location: 8150 - 10309 (+)
Gene ID: HRGMv2_2235_3_14
Type: TC
Location: 10380 - 11735 (+)
Type: TC
Location: 10380 - 11735 (+)
Gene ID: HRGMv2_2235_3_15
Type: TC
Location: 11809 - 12687 (+)
Type: TC
Location: 11809 - 12687 (+)
Gene ID: HRGMv2_2235_3_16
Type: TC
Location: 12680 - 13486 (+)
Type: TC
Location: 12680 - 13486 (+)
Gene ID: HRGMv2_2235_3_17
Type:
Location: 13486 - 13959 (+)
Type:
Location: 13486 - 13959 (+)
Gene ID: HRGMv2_2235_3_18
Type: CAZyme
Location: 13910 - 15229 (+)
Type: CAZyme
Location: 13910 - 15229 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.