Cluster: HRGMv2_2235_CGC41
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2235
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2235_67 | HRGMv2_2235_67_4 | 3774 | 5720 | + | GH13_11 |
| pfam | HRGMv2_2235_67 | HRGMv2_2235_67_5 | 5731 | 6306 | + | DUF5662 |
| NULL(UNKNOWN) | HRGMv2_2235_67 | HRGMv2_2235_67_6 | 6340 | 6570 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2235_67 | HRGMv2_2235_67_7 | 6638 | 7702 | - | 3.A.1.11.7 |
| TC | HRGMv2_2235_67 | HRGMv2_2235_67_8 | 7732 | 8508 | - | 3.A.1.11.1 |
| TC | HRGMv2_2235_67 | HRGMv2_2235_67_9 | 8505 | 9317 | - | 3.A.1.11.8 |
| TC | HRGMv2_2235_67 | HRGMv2_2235_67_10 | 9310 | 10383 | - | 3.A.1.11.8 |
Gene ID: HRGMv2_2235_67_4
Type: CAZyme
Location: 3774 - 5720 (+)
Type: CAZyme
Location: 3774 - 5720 (+)
Gene ID: HRGMv2_2235_67_5
Type: pfam
Location: 5731 - 6306 (+)
Type: pfam
Location: 5731 - 6306 (+)
Gene ID: HRGMv2_2235_67_6
Type:
Location: 6340 - 6570 (+)
Type:
Location: 6340 - 6570 (+)
Gene ID: HRGMv2_2235_67_7
Type: TC
Location: 6638 - 7702 (-)
Type: TC
Location: 6638 - 7702 (-)
Gene ID: HRGMv2_2235_67_8
Type: TC
Location: 7732 - 8508 (-)
Type: TC
Location: 7732 - 8508 (-)
Gene ID: HRGMv2_2235_67_9
Type: TC
Location: 8505 - 9317 (-)
Type: TC
Location: 8505 - 9317 (-)
Gene ID: HRGMv2_2235_67_10
Type: TC
Location: 9310 - 10383 (-)
Type: TC
Location: 9310 - 10383 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.