Cluster: HRGMv2_2235_CGC39
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2235
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2235_60 | HRGMv2_2235_60_4 | 5356 | 6294 | - | GT2 |
| pfam | HRGMv2_2235_60 | HRGMv2_2235_60_5 | 6445 | 7632 | - | LytR_cpsA_psr |
| TC | HRGMv2_2235_60 | HRGMv2_2235_60_6 | 7650 | 9065 | - | 9.B.18.1.1 |
| CAZyme | HRGMv2_2235_60 | HRGMv2_2235_60_7 | 9158 | 10156 | - | GT2 |
| CAZyme | HRGMv2_2235_60 | HRGMv2_2235_60_8 | 10153 | 11589 | - | GT2 |
Gene ID: HRGMv2_2235_60_4
Type: CAZyme
Location: 5356 - 6294 (-)
Type: CAZyme
Location: 5356 - 6294 (-)
Gene ID: HRGMv2_2235_60_5
Type: pfam
Location: 6445 - 7632 (-)
Type: pfam
Location: 6445 - 7632 (-)
Gene ID: HRGMv2_2235_60_6
Type: TC
Location: 7650 - 9065 (-)
Type: TC
Location: 7650 - 9065 (-)
Gene ID: HRGMv2_2235_60_7
Type: CAZyme
Location: 9158 - 10156 (-)
Type: CAZyme
Location: 9158 - 10156 (-)
Gene ID: HRGMv2_2235_60_8
Type: CAZyme
Location: 10153 - 11589 (-)
Type: CAZyme
Location: 10153 - 11589 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.