Cluster: HRGMv2_2235_CGC37
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2235
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2235_56 | HRGMv2_2235_56_5 | 3683 | 5128 | + | GT5 |
| pfam | HRGMv2_2235_56 | HRGMv2_2235_56_6 | 5154 | 6818 | + | MatE | Polysacc_synt | MurJ | Polysacc_synt_3 |
| STP | HRGMv2_2235_56 | HRGMv2_2235_56_7 | 6909 | 7811 | - | NUDIX |
| TC | HRGMv2_2235_56 | HRGMv2_2235_56_8 | 8001 | 8966 | + | 9.B.146.1.3 |
| pfam | HRGMv2_2235_56 | HRGMv2_2235_56_9 | 8979 | 9479 | + | GreA_GreB | GreA_GreB_N |
| peptidase | HRGMv2_2235_56 | HRGMv2_2235_56_10 | 9530 | 11065 | + | G05.UPW |
| CAZyme | HRGMv2_2235_56 | HRGMv2_2235_56_11 | 11103 | 11906 | + | GT2 |
Gene ID: HRGMv2_2235_56_5
Type: CAZyme
Location: 3683 - 5128 (+)
Type: CAZyme
Location: 3683 - 5128 (+)
Gene ID: HRGMv2_2235_56_6
Type: pfam
Location: 5154 - 6818 (+)
Type: pfam
Location: 5154 - 6818 (+)
Gene ID: HRGMv2_2235_56_7
Type: STP
Location: 6909 - 7811 (-)
Type: STP
Location: 6909 - 7811 (-)
Gene ID: HRGMv2_2235_56_8
Type: TC
Location: 8001 - 8966 (+)
Type: TC
Location: 8001 - 8966 (+)
Gene ID: HRGMv2_2235_56_9
Type: pfam
Location: 8979 - 9479 (+)
Type: pfam
Location: 8979 - 9479 (+)
Gene ID: HRGMv2_2235_56_10
Type: peptidase
Location: 9530 - 11065 (+)
Type: peptidase
Location: 9530 - 11065 (+)
Gene ID: HRGMv2_2235_56_11
Type: CAZyme
Location: 11103 - 11906 (+)
Type: CAZyme
Location: 11103 - 11906 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.