Cluster: HRGMv2_2235_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2235
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2235_35 | HRGMv2_2235_35_23 | 19960 | 21291 | + | 2.A.66.1.37 |
| peptidase | HRGMv2_2235_35 | HRGMv2_2235_35_24 | 21400 | 22854 | + | M20.UPC |
| STP | HRGMv2_2235_35 | HRGMv2_2235_35_25 | 22865 | 23908 | + | Aminotran_1_2 |
| CAZyme | HRGMv2_2235_35 | HRGMv2_2235_35_26 | 24113 | 27118 | + | GH2 |
Gene ID: HRGMv2_2235_35_23
Type: TC
Location: 19960 - 21291 (+)
Type: TC
Location: 19960 - 21291 (+)
Gene ID: HRGMv2_2235_35_24
Type: peptidase
Location: 21400 - 22854 (+)
Type: peptidase
Location: 21400 - 22854 (+)
Gene ID: HRGMv2_2235_35_25
Type: STP
Location: 22865 - 23908 (+)
Type: STP
Location: 22865 - 23908 (+)
Gene ID: HRGMv2_2235_35_26
Type: CAZyme
Location: 24113 - 27118 (+)
Type: CAZyme
Location: 24113 - 27118 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.