Cluster: HRGMv2_2235_CGC24
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2235
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2235_22 | HRGMv2_2235_22_2 | 2647 | 3132 | - | 2.A.115.2.14 |
| CAZyme | HRGMv2_2235_22 | HRGMv2_2235_22_3 | 3200 | 4204 | - | GT4 |
| pfam | HRGMv2_2235_22 | HRGMv2_2235_22_4 | 4216 | 4692 | - | VTT_dom |
| CAZyme | HRGMv2_2235_22 | HRGMv2_2235_22_5 | 4760 | 5965 | - | GT4 |
| pfam | HRGMv2_2235_22 | HRGMv2_2235_22_6 | 6154 | 7155 | - | BPD_transp_2 |
| TC | HRGMv2_2235_22 | HRGMv2_2235_22_7 | 7158 | 8261 | - | 3.A.1.2.12 |
| TC | HRGMv2_2235_22 | HRGMv2_2235_22_8 | 8245 | 9789 | - | 3.A.1.2.17 |
Gene ID: HRGMv2_2235_22_2
Type: TC
Location: 2647 - 3132 (-)
Type: TC
Location: 2647 - 3132 (-)
Gene ID: HRGMv2_2235_22_3
Type: CAZyme
Location: 3200 - 4204 (-)
Type: CAZyme
Location: 3200 - 4204 (-)
Gene ID: HRGMv2_2235_22_4
Type: pfam
Location: 4216 - 4692 (-)
Type: pfam
Location: 4216 - 4692 (-)
Gene ID: HRGMv2_2235_22_5
Type: CAZyme
Location: 4760 - 5965 (-)
Type: CAZyme
Location: 4760 - 5965 (-)
Gene ID: HRGMv2_2235_22_6
Type: pfam
Location: 6154 - 7155 (-)
Type: pfam
Location: 6154 - 7155 (-)
Gene ID: HRGMv2_2235_22_7
Type: TC
Location: 7158 - 8261 (-)
Type: TC
Location: 7158 - 8261 (-)
Gene ID: HRGMv2_2235_22_8
Type: TC
Location: 8245 - 9789 (-)
Type: TC
Location: 8245 - 9789 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.