Cluster: HRGMv2_2235_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2235
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2235_10 | HRGMv2_2235_10_30 | 40397 | 42109 | - | 9.B.34.1.3 |
| NULL(UNKNOWN) | HRGMv2_2235_10 | HRGMv2_2235_10_31 | 42193 | 43158 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2235_10 | HRGMv2_2235_10_32 | 43327 | 43995 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2235_10 | HRGMv2_2235_10_33 | 44260 | 45609 | - | 1.A.26.1.2 |
| pfam | HRGMv2_2235_10 | HRGMv2_2235_10_34 | 45765 | 46412 | - | UPF0029 | DUF1949 |
| CAZyme | HRGMv2_2235_10 | HRGMv2_2235_10_35 | 46643 | 49321 | + | GT51 |
Gene ID: HRGMv2_2235_10_30
Type: TC
Location: 40397 - 42109 (-)
Type: TC
Location: 40397 - 42109 (-)
Gene ID: HRGMv2_2235_10_31
Type:
Location: 42193 - 43158 (-)
Type:
Location: 42193 - 43158 (-)
Gene ID: HRGMv2_2235_10_32
Type:
Location: 43327 - 43995 (-)
Type:
Location: 43327 - 43995 (-)
Gene ID: HRGMv2_2235_10_33
Type: TC
Location: 44260 - 45609 (-)
Type: TC
Location: 44260 - 45609 (-)
Gene ID: HRGMv2_2235_10_34
Type: pfam
Location: 45765 - 46412 (-)
Type: pfam
Location: 45765 - 46412 (-)
Gene ID: HRGMv2_2235_10_35
Type: CAZyme
Location: 46643 - 49321 (+)
Type: CAZyme
Location: 46643 - 49321 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.