Cluster: HRGMv2_2235_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2235
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2235_10 | HRGMv2_2235_10_8 | 14948 | 15703 | - | 3.A.15.2.1 |
| pfam | HRGMv2_2235_10 | HRGMv2_2235_10_9 | 15739 | 16182 | - | N_methyl |
| TC | HRGMv2_2235_10 | HRGMv2_2235_10_10 | 16287 | 17501 | - | 3.A.15.2.1 |
| TC | HRGMv2_2235_10 | HRGMv2_2235_10_11 | 17645 | 19336 | - | 3.A.15.4.1 |
| NULL(UNKNOWN) | HRGMv2_2235_10 | HRGMv2_2235_10_12 | 19399 | 19575 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2235_10 | HRGMv2_2235_10_13 | 19606 | 20547 | - | GH26 |
Gene ID: HRGMv2_2235_10_8
Type: TC
Location: 14948 - 15703 (-)
Type: TC
Location: 14948 - 15703 (-)
Gene ID: HRGMv2_2235_10_9
Type: pfam
Location: 15739 - 16182 (-)
Type: pfam
Location: 15739 - 16182 (-)
Gene ID: HRGMv2_2235_10_10
Type: TC
Location: 16287 - 17501 (-)
Type: TC
Location: 16287 - 17501 (-)
Gene ID: HRGMv2_2235_10_11
Type: TC
Location: 17645 - 19336 (-)
Type: TC
Location: 17645 - 19336 (-)
Gene ID: HRGMv2_2235_10_12
Type:
Location: 19399 - 19575 (-)
Type:
Location: 19399 - 19575 (-)
Gene ID: HRGMv2_2235_10_13
Type: CAZyme
Location: 19606 - 20547 (-)
Type: CAZyme
Location: 19606 - 20547 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.