Cluster: HRGMv2_2235_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2235
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2235_9 | HRGMv2_2235_9_55 | 53103 | 55901 | - | 3.A.12.1.1 |
| peptidase | HRGMv2_2235_9 | HRGMv2_2235_9_56 | 56027 | 56743 | - | S14.UPW |
| NULL(UNKNOWN) | HRGMv2_2235_9 | HRGMv2_2235_9_57 | 56895 | 58373 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2235_9 | HRGMv2_2235_9_58 | 58373 | 59317 | - | GT2 |
| peptidase | HRGMv2_2235_9 | HRGMv2_2235_9_59 | 59341 | 60069 | - | M20.UNW |
| TC | HRGMv2_2235_9 | HRGMv2_2235_9_60 | 60150 | 61550 | - | 9.A.40.2.1 |
Gene ID: HRGMv2_2235_9_55
Type: TC
Location: 53103 - 55901 (-)
Type: TC
Location: 53103 - 55901 (-)
Gene ID: HRGMv2_2235_9_56
Type: peptidase
Location: 56027 - 56743 (-)
Type: peptidase
Location: 56027 - 56743 (-)
Gene ID: HRGMv2_2235_9_57
Type:
Location: 56895 - 58373 (-)
Type:
Location: 56895 - 58373 (-)
Gene ID: HRGMv2_2235_9_58
Type: CAZyme
Location: 58373 - 59317 (-)
Type: CAZyme
Location: 58373 - 59317 (-)
Gene ID: HRGMv2_2235_9_59
Type: peptidase
Location: 59341 - 60069 (-)
Type: peptidase
Location: 59341 - 60069 (-)
Gene ID: HRGMv2_2235_9_60
Type: TC
Location: 60150 - 61550 (-)
Type: TC
Location: 60150 - 61550 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.