Cluster: HRGMv2_2235_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2235
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2235_8 | HRGMv2_2235_8_15 | 16518 | 17642 | - | GH25 |
| TC | HRGMv2_2235_8 | HRGMv2_2235_8_16 | 17773 | 18570 | - | 3.D.6.1.2 |
| TC | HRGMv2_2235_8 | HRGMv2_2235_8_17 | 18587 | 19171 | - | 3.D.6.1.2 |
| TC | HRGMv2_2235_8 | HRGMv2_2235_8_18 | 19172 | 19969 | - | 3.D.6.1.2 |
| TC | HRGMv2_2235_8 | HRGMv2_2235_8_19 | 19962 | 20588 | - | 3.D.6.1.2 |
| TC | HRGMv2_2235_8 | HRGMv2_2235_8_20 | 20578 | 21519 | - | 3.D.6.1.2 |
| TC | HRGMv2_2235_8 | HRGMv2_2235_8_21 | 21532 | 22851 | - | 3.D.6.1.2 |
Gene ID: HRGMv2_2235_8_15
Type: CAZyme
Location: 16518 - 17642 (-)
Type: CAZyme
Location: 16518 - 17642 (-)
Gene ID: HRGMv2_2235_8_16
Type: TC
Location: 17773 - 18570 (-)
Type: TC
Location: 17773 - 18570 (-)
Gene ID: HRGMv2_2235_8_17
Type: TC
Location: 18587 - 19171 (-)
Type: TC
Location: 18587 - 19171 (-)
Gene ID: HRGMv2_2235_8_18
Type: TC
Location: 19172 - 19969 (-)
Type: TC
Location: 19172 - 19969 (-)
Gene ID: HRGMv2_2235_8_19
Type: TC
Location: 19962 - 20588 (-)
Type: TC
Location: 19962 - 20588 (-)
Gene ID: HRGMv2_2235_8_20
Type: TC
Location: 20578 - 21519 (-)
Type: TC
Location: 20578 - 21519 (-)
Gene ID: HRGMv2_2235_8_21
Type: TC
Location: 21532 - 22851 (-)
Type: TC
Location: 21532 - 22851 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.