Cluster: HRGMv2_2235_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2235
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2235_6 | HRGMv2_2235_6_26 | 31431 | 32840 | + | 3.A.1.1.45 |
| TC | HRGMv2_2235_6 | HRGMv2_2235_6_27 | 32948 | 33790 | + | 3.A.1.1.45 |
| TC | HRGMv2_2235_6 | HRGMv2_2235_6_28 | 33790 | 34629 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_2235_6 | HRGMv2_2235_6_29 | 34660 | 36153 | + | GH77 |
Gene ID: HRGMv2_2235_6_26
Type: TC
Location: 31431 - 32840 (+)
Type: TC
Location: 31431 - 32840 (+)
Gene ID: HRGMv2_2235_6_27
Type: TC
Location: 32948 - 33790 (+)
Type: TC
Location: 32948 - 33790 (+)
Gene ID: HRGMv2_2235_6_28
Type: TC
Location: 33790 - 34629 (+)
Type: TC
Location: 33790 - 34629 (+)
Gene ID: HRGMv2_2235_6_29
Type: CAZyme
Location: 34660 - 36153 (+)
Type: CAZyme
Location: 34660 - 36153 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.