Cluster: HRGMv2_2235_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2235
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2235_6 | HRGMv2_2235_6_17 | 22533 | 24167 | + | 9.B.142.3.8 |
| pfam | HRGMv2_2235_6 | HRGMv2_2235_6_18 | 24150 | 24662 | - | dCMP_cyt_deam_1 | MafB19-deam |
| TF | HRGMv2_2235_6 | HRGMv2_2235_6_19 | 24864 | 25853 | + | LacI |
| CAZyme | HRGMv2_2235_6 | HRGMv2_2235_6_20 | 26190 | 28460 | + | GT35 |
Gene ID: HRGMv2_2235_6_17
Type: TC
Location: 22533 - 24167 (+)
Type: TC
Location: 22533 - 24167 (+)
Gene ID: HRGMv2_2235_6_18
Type: pfam
Location: 24150 - 24662 (-)
Type: pfam
Location: 24150 - 24662 (-)
Gene ID: HRGMv2_2235_6_19
Type: TF
Location: 24864 - 25853 (+)
Type: TF
Location: 24864 - 25853 (+)
Gene ID: HRGMv2_2235_6_20
Type: CAZyme
Location: 26190 - 28460 (+)
Type: CAZyme
Location: 26190 - 28460 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.